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View Structure Prediction Details

Protein: Rlc1-PB
Organism: Drosophila melanogaster
Length: 271 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Rlc1-PB.

Description E-value Query
Range
Subject
Range
gi|114590523 - gi|114590523|ref|XP_001168245.1| PREDICTED: mitochondrial ribosomal protein L47 isoform 4 [Pan trogl...
323.0 [0..7] [238..9]

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Predicted Domain #1
Region A:
Residues: [1-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSALIKCLN LAKTVGNATV RSFLAAPKQP WQSCSAAALQ TPHVQMPMQM HTSAVRRDLM  60
   61 EFFDDKKNWS ENEVKVGRAW RTEELRIKSN KELHQLWFVL LKERNMLLTM EHECNDKMEV 120
  121 FPSPERIDKV KISMENLETV VRERNKAYHL LETGE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 55.187087
Match: PF06984.4
Description: No description for PF06984.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [156-271]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TGERPQKAVK NAFGLQVSYK ACEHALPPFM NLKWIKSRNI GYGGRAVNRF LLKYREKLYN  60
   61 AKRKAKNRSR NEVMMILRRN PNFDLDVLRR QFPDVNVDKL RNEDKIRGHY VPKVGV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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