YRC Public Data Repository - Protein Structure Prediction

Protein:	CG9363-PA
Organism:	Drosophila melanogaster
Length:	227 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9363-PA.

Description	E-value	Query Range	Subject Range
gi\|27820060 - gi\|27820060\|gb\|AAL28280.2\| GH17960p [Drosophila melanogaster]	214.0	[0..1]	[227..2]
gi\|149025262, gi... - gi\|149025262\|gb\|EDL81629.1\| rCG20683, isoform CRA_c [Rattus norvegicus], gi\|109479712\|ref\|XP_0010616...	208.0	[0..12]	[224..1]
gi\|22202624, gi\|... - gi\|7417477\|gb\|AAF62559.1\|AC007954_4 GTZ1 [Homo sapiens], gi\|22202624\|ref\|NP_665877.1\| glutathione tr...	205.0	[0..12]	[226..2]
gi\|48095935 - gi\|48095935\|ref\|XP_394562.1\| PREDICTED: similar to CG9363-PB, isoform B [Apis mellifera]	205.0	[0..14]	[226..5]
MAAI_MOUSE - Maleylacetoacetate isomerase OS=Mus musculus GN=Gstz1 PE=1 SV=1	205.0	[0..12]	[224..2]
gi\|50540032, gi\|... - gi\|50540032\|ref\|NP_001002481.1\| glutathione transferase zeta 1 isoform 2 [Danio rerio], gi\|49903077\|...	204.0	[0..15]	[221..10]
gi\|50748528 - gi\|50748528\|ref\|XP_421288.1\| PREDICTED: hypothetical protein isoform 3 [Gallus gallus]	204.0	[0..13]	[224..3]

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Predicted Domain #1

Region A:
Residues: [1-227]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTNLCPNAS SSDIQPILYS YWRSSCSWRV RIAMNLKEIP YDIKPISLIK SGGEQHCNEY  60
   61 REVNPMEQVP ALQIDGHTLI ESVAIMHYLE ETRPQRPLLP QDVHKRAKVR EIVEIICSGI 120
  121 QPLQNLIVLI HVGEEKKKEW AQHWITRGFR AVEKALSTSA GKYCVGDEIS MADCCLVPQV 180
  181 FNARRFHVDL RPYPIILRID RELESNPAFR AAHPSNQPDC PPELPNK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	54.0
Match:	2cz2A
Description:	Crystal structure of glutathione transferase zeta 1-1 (maleylacetoacetate isomerase) from Mus musculus (form-1 crystal)
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits