YRC Public Data Repository - Protein Structure Prediction

Protein:	CG9362-PA
Organism:	Drosophila melanogaster
Length:	246 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9362-PA.

Description	E-value	Query Range	Subject Range
gi\|149025262, gi... - gi\|149025262\|gb\|EDL81629.1\| rCG20683, isoform CRA_c [Rattus norvegicus], gi\|109479712\|ref\|XP_0010616...	205.0	[0..30]	[242..1]
gi\|48095935 - gi\|48095935\|ref\|XP_394562.1\| PREDICTED: similar to CG9363-PB, isoform B [Apis mellifera]	203.0	[0..32]	[245..5]
gi\|50540032, gi\|... - gi\|50540032\|ref\|NP_001002481.1\| glutathione transferase zeta 1 isoform 2 [Danio rerio], gi\|49903077\|...	203.0	[0..33]	[240..10]
gi\|112984030, gi... - gi\|95102880\|gb\|ABF51381.1\| glutathione-S-transferase [Bombyx mori], gi\|85740627\|gb\|ABC79691.1\| gluta...	201.0	[0..30]	[245..1]
MAAI_MOUSE - Maleylacetoacetate isomerase OS=Mus musculus GN=Gstz1 PE=1 SV=1	200.0	[0..31]	[242..3]
gi\|50748528 - gi\|50748528\|ref\|XP_421288.1\| PREDICTED: hypothetical protein isoform 3 [Gallus gallus]	199.0	[0..31]	[242..3]
gi\|58382539, gi\|... - gi\|58382539\|ref\|XP_312009.2\| glutathione transferase, zeta class (AGAP002898-PA) [Anopheles gambiae ... gi\|21541582 - gi\|21541582\|gb\|AAM61889.1\|AF515522_1 glutathione S-transferase [Anopheles gambiae]	199.0	[0..34]	[245..12]
gi\|91086805 - gi\|91086805\|ref\|XP_973541.1\| PREDICTED: similar to Probable maleylacetoacetate isomerase 2 (MAAI 2) ...	199.0	[0..33]	[245..28]

Back

Predicted Domain #1

Region A:
Residues: [1-246]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASATQLTHR GIHLAGLYRS SWSKPLFRHL ATKPILYSYW PSSCSWRVRV ALAIKKIDYD  60
   61 IKPTSLLKTV SGHAYTDEYR EVNPMQKVPS LKIDGHTLCD SVAIIHYLEE TRPQPALLPQ 120
  121 DPVKRAKIRE IVELICSGIQ PLQNVSVLDH IGKDQSLQWA QHWISRGFQG LEKVLSHSAG 180
  181 KFCVGDELSM ADICLVPQVR NARRYKADLT PYPTIVRLNQ ELQELDVFKA THPSTQPDCP 240
  241 PEFAKK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	52.0
Match:	2cz2A
Description:	Crystal structure of glutathione transferase zeta 1-1 (maleylacetoacetate isomerase) from Mus musculus (form-1 crystal)
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits