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View Structure Prediction Details

Protein: Or85f-PA
Organism: Drosophila melanogaster
Length: 392 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Or85f-PA.

Description E-value Query
Range
Subject
Range
gi|125773175, gi... - gi|54637579|gb|EAL26981.1| Or85f [Drosophila pseudoobscura pseudoobscura], gi|125773175|ref|XP_00135...
gi|54637579|gb|E... - GA14128-PA [Drosophila pseudoobscura], Or85f [Drosophila pseudoobscura pseudoobscura]
185.0 [0..1] [392..1]

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Predicted Domain #1
Region A:
Residues: [1-205]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPVQYSYED FARLPTTVFW IMGYDMLGVP KTRSRRILYW IYRFLCLASH GVCVGVMVFR  60
   61 MVEAKTIDNV SLIMRYATLV TYIINSDTKF ATVLQRSAIQ SLNSKLAELY PKTTLDRIYH 120
  121 RVNDHYWTKS FVYLVIIYIG SSIMVVIGPI ITSIIAYFTH NVFTYMHCYP YFLYDPEKDP 180
  181 VWIYISIYAL EWLHSTQMVI SNIGA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [206-392]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DIWLLYFQVQ INLHFRGIIR SLADHKPSVK HDQEDRKFIA KIVDKQVHLV SLQNDLNGIF  60
   61 GKSLLLSLLT TAAVICTVAV YTLIQGPTLE GFTYVIFIGT SVMQVYLVCY YGQQVLDLSG 120
  121 EVAHAVYNHD FHDASIAYKR YLLIIIIRAQ QPVELNAMGY LSISLDTFKQ LMSVSYRVIT 180
  181 MLMQMIQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle