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View Structure Prediction Details

Protein: CG8129-PA
Organism: Drosophila melanogaster
Length: 316 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8129-PA.

Description E-value Query
Range
Subject
Range
gi|90413761, gi|... - gi|90413761|ref|ZP_01221749.1| threonine dehydratase [Photobacterium profundum 3TCK], gi|90325230|gb...
314.0 [0..1] [312..111]

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Predicted Domain #1
Region A:
Residues: [1-316]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKAAPIMKI QKCRNYKARV IVDGNDMGEA KSLAMRMSRE EGLLYVNGYD HPHIMAGQGT  60
   61 IGLEILEQVP EPDAVVVPVG GGGLIAGIAT AVKALSPKTK IIGVESEKCA SFTRAMENDG 120
  121 PIHTPIKNTL ADGLAVPKVG YNAYATAMPL IDRMVVVKEE WIAVAILRLV EEEKCVVEGA 180
  181 GGAGLAAILA GHLDELKGKK VVVLLCGGNI DTTVFGRCLE RGLAAVGRLV KFNVEVSDRP 240
  241 GGINDLCALL VRVGVSIKDI MHERAWLRDV YTVEVKVVCE TVDWTHSLQL KNELKKFYSK 300
  301 VQFSDVPLAL SNDTDS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.30103
Match: 1tdjA
Description: THREONINE DEAMINASE (BIOSYNTHETIC) FROM E. COLI
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
lyase activity 0.92121242786289 bayes_pls_golite062009
catalytic activity 0.115197515122073 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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