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View Structure Prediction Details

Protein: CG8444-PA
Organism: Drosophila melanogaster
Length: 320 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8444-PA.

Description E-value Query
Range
Subject
Range
gi|109130442 - gi|109130442|ref|XP_001093417.1| PREDICTED: similar to ATPase, H+ transporting, lysosomal accessory ...
446.0 [0..2] [319..107]

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Predicted Domain #1
Region A:
Residues: [1-62]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRVFVIFSL FIAAINASGE FTVLNRPKAI SFKGNDALES HYVGDVLYAS MGNAVSGDTN  60
   61 WN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [63-231]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLTINDPFNL AKGVILVHVQ GIGHVTTAGN VKTYELTGSG TDASLNALAA ELEAANEPVC  60
   61 DINFEQFDDG VQAWKSCFGD FEAPAAKPTK HLNPSLHTAD KQFLQEVGFI NSAADHLAEM 120
  121 AKPSNVLMLR VSVDGVAKAH GEKSVAVEEA NKLLSAAISR LLAASQKSS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [232-320]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSVLFVQTTE KDVAASRAKR DTIAASTTNP YNLAVYYGSD YPVIFNIILW FMVVFGLSLL  60
   61 AICYAIAAMD PGRDSIIYRM TSTRIKKDN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 61.102373
Match: PF07850.5
Description: No description for PF07850.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle