| Protein: | FBpp0293839 |
| Organism: | Drosophila melanogaster |
| Length: | 1293 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0293839.
| Description | E-value | Query Range |
Subject Range |
|
|
833.0 | [0..1] | [1292..1] |
|
Region A: Residues: [1-109] |
1 11 21 31 41 51
| | | | | |
1 MKFPDYVPNN MLVGDRTTWE YHTVAVTRVP GYGFGIAVSG GRDNPHFANG DPSIAVSDVL 60
61 KGGPAEDRLQ VNDRIISVNG VSLENVEYAT AVQVLRDSGN TVQLVVKRR
|
| Detection Method: |  |
| Confidence: | 32.0 |
| Match: | 2h2cA |
| Description: | No description for 2h2cA was found. |
|
Region A: Residues: [110-252] |
1 11 21 31 41 51
| | | | | |
1 VPLNPINAAG AVQHQHSHSL SSVGLMANGS GGVAPTPITS LSQPNSLNSS LVQNASSGQP 60
61 IKVTLTKGGK KDDYGVVLGC RLFVKEISSK AREQLNANGY SLQEGDIITR IHNTNCGDTM 120
121 SLKEAKKIID GCKERLNLVV LRD
|
| Detection Method: | |
| Confidence: | 15.154902 |
| Match: | 2rczA |
| Description: | No description for 2rczA was found. |
|
Region A: Residues: [253-362] |
1 11 21 31 41 51
| | | | | |
1 ITNQTAVSQL NLNNSASHQA SGNIYATHQP QVSGCSSSNN NLEDPYLPGG ASYSSQNLYV 60
61 QPPTRTSNGP NINGNGLNDE KSNLTPRGRS RGPIMDGVSL QQLDRPVTPT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [363-495] |
1 11 21 31 41 51
| | | | | |
1 RGRSAAIDEP PRPPPPRGSS GGAAQEDFYS SRRQLYEERQ SAEPRFISFQ KEGSVGIRLT 60
61 GGNEAGIFVT AVQPGSPASL QGLMPGDKIL KVNDMDMNGV TREEAVLFLL SLQDRIDLIV 120
121 QYCKEEYDEV VTN
|
| Detection Method: | |
| Confidence: | 27.221849 |
| Match: | 1tp3A |
| Description: | PDZ3 domain of PSD-95 protein complexed with KKETPV peptide ligand |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [496-790] |
1 11 21 31 41 51
| | | | | |
1 QRGDSFHIKT HFHCDNPSKG EMAFKAGDVF RVIDTLHNGV VGSWQVLKIG RGHQEMQRGV 60
61 IPNKSRAEEL ATAQFNATKK EMNANESRGN FFRRRRSTHR RSKSLSRENW DDVVFSDSIS 120
121 KFPAYERVVL RHPGFVRPVV LFGPVSDLAR ERLAKDFPDK FSTPLQDDDK SAATSGKCRI 180
181 VRLSNIRDVM DRGKHALLDI TPNAVDRLNY AQFYPVVIFL KTDSKHVIKQ LRHGLPKAAH 240
241 KSSKKLLEQC QKLERVWSHI FSTQIALSDE ESWYRKLRDS IDLQQSGAVW MSESK
|
| Detection Method: | |
| Confidence: | 80.69897 |
| Match: | 1kjwA |
| Description: | Psd-95; Guanylate kinase-like domain of Psd-95 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [791-1293] |
1 11 21 31 41 51
| | | | | |
1 VPYDHAVPAN PNRRQTMDSS KYSIYGTNVP PQQQQPGVGG DTAAVRPQSL YGINAPDLPP 60
61 RIDRQSKPGD IPLNTSGSSS RNGTLGRSAQ ERLFGKAVVQ DDVQAEYITR NALVGSGAAE 120
121 TLDRQQQQQQ QTHASLERQA RLNAQLKANG VGAGGGGAST YDSVSSYDSY NNTQMAMQNL 180
181 GRLGPNAPDD LKSVPNANGR PLPPTGQSHE YGRTPHDHRS FGGPNDLNRQ SSPGRPHYHD 240
241 MNASRNIDPR NGTPQRPSNL GLESSPRKPL VETKTDYGKY SRNNSVTQAD YTKLPKTAPH 300
301 GVVPPPNVSN GQGQMNGSGT PSSNGSGPFK PVPPPKPKNY RPPVQSGGSS GSGGTTPWEN 360
361 GDSGSPRSPN GFYYPPTPSH HHYGQQATPG SPSNGHMQPP PPQQQQPTYG GSNGNYGQAP 420
421 PPQSYPQANG YNGNGHHYNG GSGTGPYIAP HRGMPPPIGN LPPHTPERHA LDLAGSREQR 480
481 GSAFELYRKP QIGATAGHHH NMR
|
| Detection Method: | |
| Confidence: | 50.522879 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
