YRC Public Data Repository - Protein Structure Prediction

Protein:	CG9773-PA
Organism:	Drosophila melanogaster
Length:	275 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9773-PA.

Description	E-value	Query Range	Subject Range
gi\|54639557\|gb\|E... - GA22025-PA [Drosophila pseudoobscura], GA22025 [Drosophila pseudoobscura pseudoobscura] gi\|195157388, gi... - gi\|195157388\|ref\|XP_002019578.1\| GL12139 [Drosophila persimilis], gi\|194116169\|gb\|EDW38212.1\| GL1213... gi\|125778023, gi... - gi\|54639557\|gb\|EAL28959.1\| GA22025 [Drosophila pseudoobscura pseudoobscura], gi\|125778023\|ref\|XP_001...	363.0	[0..1]	[275..1]
gi\|55241869, gi\|... - gi\|58382531\|ref\|XP_312002.2\| ENSANGP00000018672 [Anopheles gambiae str. PEST], gi\|55241869\|gb\|EAA080...	350.0	[0..2]	[274..1]
UNC50_DANRE - Protein unc-50 homolog OS=Danio rerio GN=unc50 PE=2 SV=1	335.0	[0..30]	[274..3]
gi\|108869603, gi... - gi\|157137980\|ref\|XP_001664104.1\| hypothetical protein AaeL_AAEL013898 [Aedes aegypti], gi\|108869603\|...	334.0	[0..7]	[274..1]
gi\|109103934 - gi\|109103934\|ref\|XP_001103333.1\| PREDICTED: similar to unc-50 homolog [Macaca mulatta]	327.0	[0..43]	[274..26]
gi\|114579090, gi... - gi\|55598910\|ref\|XP_515641.1\| PREDICTED: unc-50 homolog isoform 6 [Pan troglodytes], gi\|114579095\|ref... UNC50 - unc-50 homolog (C. elegans)	327.0	[0..43]	[274..26]
UNC50_BOVIN - Protein unc-50 homolog OS=Bos taurus GN=UNC50 PE=2 SV=1	326.0	[0..43]	[274..26]

Back

Predicted Domain #1

Region A:
Residues: [1-275]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQYSHVKYT QSPTPSVVSG YSSASRLHSP LPPPANHRRD CLSATTKSYK YLRRLLKFNQ  60
   61 MDFEFALWQM LYLFVAPQKV YRNFNYRKQT KSQFARDDPA FLVLLVVCLC VTSLGFAYVL 120
  121 GLSFWQSISF IFYVVFVDCI FVGIIIASFF WAVTNRYLRT NSLEPDIEWG YAFDVHLNAF 180
  181 FPPLMLLHFI QLFFYNWLIS QTWFISRFLG NTFWLMGMGY YVYITFLGYN CIPHLKNTRI 240
  241 ILIALPIIFL LFLVVTIIGW NATISFVNFY KYRVY

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits