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View Structure Prediction Details

Protein: mRpL19-PA
Organism: Drosophila melanogaster
Length: 306 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mRpL19-PA.

Description E-value Query
Range
Subject
Range
gi|157105510, gi... - gi|157105510|ref|XP_001648902.1| 39S ribosomal protein L19, mitochondrial precursor [Aedes aegypti],...
319.0 [0..35] [306..47]

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Predicted Domain #1
Region A:
Residues: [1-94]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLSTRVMLN RLTQQCVYKR IVTFSTKTAE HVIENQEEQK KEAPPTTPTS PVNRKTIIPA  60
   61 NYRFVYPEFL PDPKVEWRNL VREKLERLDM LDRR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [95-198]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KQIDLPEFYV GSVLAVTSSD PHAAGKTSRF VGICINRDRC GLRARFILRN VIDHQGMEVV  60
   61 YELYDPTILK IEVLRLEKRL DDSLFYLRDA LPEYSTFDEN MEAE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.0
Match: 2ftcK
Description: No description for 2ftcK was found.

Predicted Domain #3
Region A:
Residues: [199-306]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PLEEGAPVPV NDIKVVLRPR PWLERWERQN LRGVANIDEY LKDKHRLSAA KVQKPWEKYD  60
   61 MMKDYRSSIP EEEQTEIFAE VHTELHALEL QRKRNKRKRT FIKPKQLA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle