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View Structure Prediction Details

Protein: Mkk4-PA, Mkk4-PB...
Organism: Drosophila melanogaster
Length: 424 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Mkk4-PA, Mkk4-PB....

Description E-value Query
Range
Subject
Range
gi|7024504 - gi|7024504|gb|AAF35430.1|AF061255_1 JNK kinase 2 [Drosophila melanogaster]
296.0 [0..1] [424..1]

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Predicted Domain #1
Region A:
Residues: [1-107]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAERPKNLFA TGSSRSRNPP DQLSLNNLSI RHPPSSTSST SSGSTSSGSS SSSQHNHVTR  60
   61 CFGAQQPQQT PPVASSQVPP VPAASSSSAA DRHRERIRQQ ACGKLQF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [108-424]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GEGGANTHTF TSDDLEDEGE IGRGAFGAVN KMTFKKLDKV MAVKRIRSTV DEKEQKQLLM  60
   61 DLEVVMKSNE CIYIVQFYGA LFKEGDCWIC MELMDTSLDK FYKYIYEKQQ RHIPESILAK 120
  121 ITVATVNALN YLKEELKIIH RDVKPSNILL HRRGDIKLCD FGISGQLVDS IAKTKDAGCR 180
  181 PYMAPERIDP ERAKGYDVRS DVWSLGITLM EVATGNFPYR KWDSVFEQLC QVVQGEPPRL 240
  241 LTSYNGMEFS KEFVDFVNTC LIKKESDRPK YSRLLEMPFI RRGETSHTDV AVYVADILES 300
  301 MEKDGITQFT ANQQAES

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.09691
Match: 2dylA
Description: No description for 2dylA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle