| Protein: | CG8007-PA |
| Organism: | Drosophila melanogaster |
| Length: | 416 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8007-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
297.0 | [0..1] | [406..267] |
|
Region A: Residues: [1-194] |
1 11 21 31 41 51
| | | | | |
1 MKNRFFFSFT GYFPLGSEHC LTWICLDVLF CTASIMHLCT ISVDRYLSLR YPMRFGRNKT 60
61 RRRVTLKIVF VWLLSIAMSL PLSLMYSKNH ASVLVNGTCQ IPDPVYKLVG SIVCFYIPLG 120
121 VMLLTYCLTV RLLARQRQNL GGGQQTAAAT PGWASGWLGQ APALGGPAGA APATVGSTLS 180
181 PHSAHNQGSS LTVQ
|
| Detection Method: |  |
| Confidence: | 20.69897 |
| Match: | 2j4yA |
| Description: | No description for 2j4yA was found. |
|
Region A: Residues: [195-287] |
1 11 21 31 41 51
| | | | | |
1 SDGSGYLAAP GTPCPGRRKL SISKTASVVT WDSSRHRRRG SSFGGVRTSL LLTPTKTATT 60
61 SNSSTPLRRS ATLRSHQNMN YQGAGECGGK TRT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [288-416] |
1 11 21 31 41 51
| | | | | |
1 TTSSPCMLQR QQTVRSHHSR NSSVISRNSS RHGRIIRLEQ KATKVLGVVF FTFVILWSPF 60
61 FVLNLLPTVC AECEERISHW VFDVVTWLGY ASSMVNPIFY TIFNKVFRQA FKKVLLCRYS 120
121 STSAWRPSR
|
| Detection Method: | |
| Confidence: | 4.26 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
