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View Structure Prediction Details

Protein: Or85c-PA
Organism: Drosophila melanogaster
Length: 389 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Or85c-PA.

Description E-value Query
Range
Subject
Range
gi|125777174, gi... - gi|54639264|gb|EAL28666.1| GA14720-PA [Drosophila pseudoobscura], gi|125777174|ref|XP_001359520.1| G...
216.0 [0..1] [389..1]

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Predicted Domain #1
Region A:
Residues: [1-197]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFMKYAVFF YTSVGIEPYT IDSRSKKASL WSHLLFWANV INLSVIVFGE ILYLGVAYSD  60
   61 GKFIDAVTVL SYIGFVIVGM SKMFFIWWKK TDLSDLVKEL EHIYPNGKAE EEMYRLDRYL 120
  121 RSCSRISITY ALLYSVLIWT FNLFSIMQFL VYEKLLKIRV VGQTLPYLMY FPWNWHENWT 180
  181 YYVLLFCQNF AGHTSAS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [198-389]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GQISTDLLLC AVATQVVMHF DYLARVVEKQ VLDRDWSENS RFLAKTVQYH QRILRLMDVL  60
   61 NDIFGIPLLL NFMVSTFVIC FVGFQMTVGV PPDIMIKLFL FLFSSLSQVY LICHYGQLIA 120
  121 DASSSLSISA YKQNWQNADI RYRRALVFFI ARPQRTTYLK ATIFMNITRA TMTDLLQVSY 180
  181 KFFALLRTMY IK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle