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View Structure Prediction Details

Protein: Coq2-PA
Organism: Drosophila melanogaster
Length: 392 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Coq2-PA.

Description E-value Query
Range
Subject
Range
COQ2_DROPS - 4-hydroxybenzoate polyprenyltransferase, mitochondrial OS=Drosophila pseudoobscura pseudoobscura GN=...
gi|125775189, gi... - gi|54638587|gb|EAL27989.1| GA21912 [Drosophila pseudoobscura pseudoobscura], gi|125775189|ref|XP_001...
260.0 [0..1] [392..1]

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Predicted Domain #1
Region A:
Residues: [1-238]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYALRHLRLQ SARHFRSSYA AAATTKHMLP RQPARVLIGD WSTWDKSRLQ DVCSRSSSTA  60
   61 TEPVKQQTPL QELVSAAKPY AQLMRIDRPI GTYLLFWPCA WSIALSADAG CWPDLTMLGL 120
  121 FGTGALIMRG AGCTINDLWD KDIDAKVERT RLRPLASGQI SQFDAIVFLS AQLSLGLLVL 180
  181 VQLNWQSILL GASSLGLVIT YPLMKRVTYW PQLVLGMAFN WGALLGWCAT QGSVNLAA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [239-392]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CLPLYLSGVC WTIVYDTIYA HQDKLDDLQI GVKSTALRFG ENTKVWLSGF TAAMLTGLSA  60
   61 AGWACDQTVP YYAAVGVVGA HLVQQIYSLN IDNPSDCAKK FISNHQVGLI LFLGIVLGTL 120
  121 LKSDESKKQR QSSLTTSTAS SYVPALPQKP EVLS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle