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View Structure Prediction Details

Protein: Gfr-PA
Organism: Drosophila melanogaster
Length: 337 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gfr-PA.

Description E-value Query
Range
Subject
Range
gi|109123815 - gi|109123815|ref|XP_001113968.1| PREDICTED: similar to solute carrier family 35, member E1 [Macaca m...
155.0 [0..6] [328..309]

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Predicted Domain #1
Region A:
Residues: [1-170]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKNLEEHNR LVNKYLKIFF VVSLYWCTSI LTVFVNKHLL SSDTVNLGAP LFMSWFQCVV  60
   61 STVICFVASR LSRKYPSVFT FPEGNPLDID TFRKILPLSV LYTLMIGANN LSLSYVTVAF 120
  121 YYIGRSLTTV FSVVLTYVIL RQRTSFKCLL CCGAIVVGFW LGVDQESLTE 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [171-337]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VFSWRGTIFG VLSSLALAMF SIQTKKSLGY VNQEVWLLSY YNNLYSTLLF LPLIIINGEL  60
   61 ESIITYPHLW ASWFWAAMTL SGLCGFAIGF VTALEIKVTS ALTHNISGTA KACAQTVIAT 120
  121 QYYHDVRSAL WWTSNVVVLV ASAAYTRVKQ LEMMRQHQQR STATQKA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.86
Match: 2i68A
Description: No description for 2i68A was found.

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