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View Structure Prediction Details

Protein: gi|24645000, gi|...
Organism: Drosophila melanogaster
Length: 302 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24645000, gi|....

Description E-value Query
Range
Subject
Range
gi|113194755, gi... - gi|116007974|ref|NP_001036686.1| CG7549, isoform C [Drosophila melanogaster], gi|113194755|gb|ABI311...
243.0 [0..1] [302..262]

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Predicted Domain #1
Region A:
Residues: [1-214]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQSIARIAN VGKEHRTVSS HPNYLQFEEP KFDLKDVTVE ELAAAANVTV DTIKHAIYVR  60
   61 EQQLKAEHRA QLAAKLREEF MRTSTVRTTT TTTTTTTTTP RPQKSLAEHK VSKVMNAPKE 120
  121 YYPVGYDKNF DDNFKSKVDL PPTSFSCAKQ KHFPGLYADT DLGCMVFHVC ALTDDGMVRK 180
  181 SFLCPENTLF DQTILKCNWW FYVDCSSSTS VYDS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.19
Match: 1wawA
Description: Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [215-302]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NIPISKSYQL MKSLTYFSKY AGGQRHEQGG DKDENALDID SLRESMEGVA RRQEQAKKAE  60
   61 LRVEEQRSMP KEDHEHVVPA EAEQQLSN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle