| Protein: | dsx-PA, FBpp0303106 |
| Organism: | Drosophila melanogaster |
| Length: | 549 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dsx-PA, FBpp0303106.
| Description | E-value | Query Range |
Subject Range |
|
|
215.0 | [0..1] | [423..1] |
|
Region A: Residues: [1-102] |
1 11 21 31 41 51
| | | | | |
1 MVSEENWNSD TMSDSDMIDS KNDVCGGASS SSGSSISPRT PPNCARCRNH GLKITLKGHK 60
61 RYCKFRYCTC EKCRLTADRQ RVMALQTALR RAQAQDEQRA LH
|
| Detection Method: |  |
| Confidence: | 27.09691 |
| Match: | 1lpvA |
| Description: | DM domain of Doublesex (dsx) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [103-341] |
1 11 21 31 41 51
| | | | | |
1 MHEVPPANPA ATTLLSHHHH VAAPAHVHAH HVHAHHAHGG HHSHHGHVLH HQQAAAAAAA 60
61 APSAPASHLG GSSTAASSIH GHAHAHHVHM AAAAAASVAQ HQHQSHPHSH HHHHQNHHQH 120
121 PHQQPATQTA LRSPPHSDHG GSVGPATSSS GGGAPSSSNA AAATSSNGSS GGGGGGGGGS 180
181 SGGGAGGGRS SGTSVITSAD HHMTTVPTPA QSLEGSCDSS SPSPSSTSGA AILPISVSV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [342-420] |
1 11 21 31 41 51
| | | | | |
1 NRKNGANVPL GQDVFLDYCQ KLLEKFRYPW ELMPLMYVIL KDADANIEEA SRRIEEARVE 60
61 INRTVAQIYY NYYTPMALV
|
| Detection Method: | |
| Confidence: | 3.97 |
| Match: | 1zv1A |
| Description: | Crystal structure of the dimerization domain of doublesex protein from D. melanogaster |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [421-549] |
1 11 21 31 41 51
| | | | | |
1 NGAPMYLTYP SIEQGRYGAH FTHLPLTQIC PPTPEPLALS RSPSSPSGPS AVHNQKPSRP 60
61 GSSNGTVHSA ASPTMVTTMA TTSSTPTLSR RQRSRSATPT TPPPPPPAHS SSNGAYHHGH 120
121 HLVSSTAAT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
