YRC Public Data Repository - Protein Structure Prediction

Protein:	Sp7-PB
Organism:	Drosophila melanogaster
Length:	241 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Sp7-PB.

Description	E-value	Query Range	Subject Range
FBpp0308322, FBp... - The gene Serine protease 7 is referred to in FlyBase by the symbol Dmel\Sp7 (CG3066, FBgn0037515). I...	241.0	[0..1]	[241..151]
gi\|54639532, gi\|... - gi\|54639532\|gb\|EAL28934.1\| GA15903 [Drosophila pseudoobscura pseudoobscura], gi\|125777951\|ref\|XP_001... gi\|54639532\|gb\|E... - GA15903-PA [Drosophila pseudoobscura], GA15903 [Drosophila pseudoobscura pseudoobscura]	235.0	[0..1]	[241..143]
gi\|56418397 - gi\|56418397\|gb\|AAV91006.1\| hemolymph proteinase 8 [Manduca sexta]	230.0	[0..1]	[241..129]
gi\|91083507 - gi\|91083507\|ref\|XP_972628.1\| PREDICTED: similar to proclotting enzyme [Tribolium castaneum]	228.0	[0..1]	[241..134]
gi\|2253393, gi\|2... - gi\|2253393\|gb\|AAB62929.1\| serine protease 14D [Anopheles gambiae], gi\|224038213\|gb\|ACN38252.1\| serin...	226.0	[0..2]	[239..123]
AGAP003250-PA - CLIPB4: CLIP-domain serine protease\|protein_coding\|2R:34471993:34473530:-1\|gene:AGAP003250 gi\|31197615, gi\|... - gi\|31197615\|ref\|XP_307755.1\| CLIP-domain serine protease subfamily B (AGAP003250-PA) [Anopheles gamb...	225.0	[0..2]	[239..123]
gi\|25989211 - gi\|25989211\|gb\|AAL31707.1\| prophenoloxidase activating factor 3 [Bombyx mori]	225.0	[0..1]	[238..127]
gi\|22779448 - gi\|22779448\|dbj\|BAC15604.1\| prophenoloxidase activating factor-III [Holotrichia diomphalia]	223.0	[0..1]	[240..111]

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Predicted Domain #1

Region A:
Residues: [1-241]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLEYVDNR GRRELSCGGS LINNRYVLTA AHCVIGAVET EVGHLTTVRL GEYDTSKDVD  60
   61 CIDDICNQPI LQLGIEQATV HPQYDPANKN RIHDIALLRL DRPVVLNEYI QPVCLPLVST 120
  121 RMAINTGELL VVSGWGRTTT ARKSTIKQRL DLPVNDHDYC ARKFATRNIH LISSQLCVGG 180
  181 EFYRDSCDGD SGGPLMRRGF DQAWYQEGVV SFGNRCGLEG WPGVYTRVAD YMDWIVETIR 240
  241 P

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	58.522879
Match:	2olgA
Description:	No description for 2olgA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits