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View Structure Prediction Details

Protein: CG2616-PA, FBpp0...
Organism: Drosophila melanogaster
Length: 449 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG2616-PA, FBpp0....

Description E-value Query
Range
Subject
Range
gi|54639530, gi|... - gi|54639530|gb|EAL28932.1| GA15403 [Drosophila pseudoobscura pseudoobscura], gi|125777947|ref|XP_001...
gi|125777947|ref... - GA15403-PA [Drosophila pseudoobscura], GA15403 [Drosophila pseudoobscura pseudoobscura]
314.0 [0..64] [435..56]

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Predicted Domain #1
Region A:
Residues: [1-84]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKEDSGASS AEANPAESEI SMGRGPRPRS FTGGGGGGGT GGSGGSGGTS GGNNLKPERS  60
   61 AREDDAINRL TDSKSSHRKL LSDP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [85-449]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RFQIRPLQQV ISACTGAMIT ACFMTPLDVI KTRMQSQQSP AHKCFFYSNG LMDHLFASGP  60
   61 NGSELASLRQ RPQFSSSWDA LMKISRHEGL AALWSGLGPT LVSALPSTII YFVAYEQFKA 120
  121 RYLQIYESHY NKSQEPRHLE IRDTKKSLPS VVPMMSGVTA RICAVTVVSP IELVRTKMQA 180
  181 QRQTYAQMLQ FVRSVVALQG VWGLWRGLRP TILRDVPFSG IYWPIYESLK QNLGHGSQPS 240
  241 FSLSFLAGVM AGTVAAIVTT PFDVVKTHEQ IEFGERVIFT DSPARDFGKK STFSRLTGIY 300
  301 RTHGVRGLFA GCGPRLLKVA PACAIMISTF EYSKSFFFHY NVRHHNEALL LDNPKDTTVE 360
  361 DDDIE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.522879
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle