YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|23170569, gi|...
Organism: Drosophila melanogaster
Length: 540 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|23170569, gi|....

Description E-value Query
Range
Subject
Range
wa-cup-PB - The gene walker cup is referred to in FlyBase by the symbol Dmel\wa-cup (CG10113, FBgn0037502). It i...
229.0 [0..1] [540..1]

Back

Predicted Domain #1
Region A:
Residues: [1-540]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSQMSLSEG LQAPIAGVQP HLQPWEAHAW SPDRLGSMYS DWAMFFFTQQ RYANGLRYFN  60
   61 SALDLNPFNE RALMRRSQLK RSMGLASEAL KDCSRAEDLL MSRKPPVTNP NVSLEVCDAL 120
  121 YESNRLEDSK INLHCHLKRF SSGQRGPVLD RLNVLNENFH DTLSDDTTMS VQRLINRMMA 180
  181 SLAKEPKDIK DTCDVVSIME NEETHLSPLE MARRKRHFKI YNQTYLNKCW VDKTLHTRSP 240
  241 MYALHQQKYP NEAFYNKHRE ENLYRIQYQT RRNMFKILRS IRLLIRVGEL NKLTTFIEEV 300
  301 MGDYVTIKTN RVMPWKFEFT NEVYNYLGLA RINEYKIPSN MTVLQGKQRL LTLFRLPLSN 360
  361 SLDMKKSKTK RTSALNITRS ATTDPKAEHF KKQVVRLENR MRFAEYHIER AYLLHELAQE 420
  421 HLNCNSFDGA CSMARMALEE AIKCKSVIWS FLSLMVICKA HAILGKIERE KEILAEAFEL 480
  481 AKKMKNLDLC LFIDICIKVN AEEMEMKRMV TTDLTAKRQK FGSKMFQSND QVNEDRNQIT 540
  541 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.045757
Match: 2gw1A
Description: No description for 2gw1A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle