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View Structure Prediction Details

Protein: djl-PA
Organism: Drosophila melanogaster
Length: 286 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for djl-PA.

Description E-value Query
Range
Subject
Range
gi|7549210 - gi|7549210|gb|AAF63787.1|AF142406_1 200 kDa antigen p200 [Babesia bigemina]
145.0 [0..1] [286..191]

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Predicted Domain #1
Region A:
Residues: [1-286]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKRPALVYR CLQTSVKRSY HLNAHEHLRK KEILKPESQP SQKHKKFGDG SIGVIHVIKN  60
   61 EYYGLPNPMH RKFREDLEKH QDRRKESNLS LKEEKREDLE KMLKECQKLV KEITMQANDG 120
  121 DVTKICKELA QKEKMDKEKI KKKCRELAAR EKCEKDKLKK KCKKLLKKDK CKKKDTCEEE 180
  181 KPCEEEDPCE KKSCCPKDPC AKKPKKVDPC KKKDPCKKED PCKKKAVNWK KKCKEVAERE 240
  241 QCKKLAEKKK FKKMIKICKN LAAKEKCKKM AEKEMCRKKA KKGKKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.39794
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle