YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|24644615, gi|...
Organism: Drosophila melanogaster
Length: 1573 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24644615, gi|....

Description E-value Query
Range
Subject
Range
gi|29726781 - gi|29726781|pdb|1NW3|A Chain A, Structure Of The Catalytic Domain Of Human Dot1l, A Non-Set Domain N...
611.0 [0..5] [431..3]

Back

Predicted Domain #1
Region A:
Residues: [1-422]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATPQVKDLV LRSPAGSSDV ISFAWPLQIG HGQDKHDNGI DIIDTIKFVC DELPSMSSAF  60
   61 EETNLHQIDT ACYKTMTGLV DRFNKAVDSI VALEKGTSLP AERLNKFAHP SLLRHILQLV 120
  121 YNAAVLDPDK LNQYEPFSPE VYGETSYELV QQMLKHVTVS KEDTFIDLGS GVGQVVLQMA 180
  181 GSFPLKTCIG IEKADTPARY AERMDVIFRQ YMGWFGKRFC EYKLIKGDFL VDEHRENITS 240
  241 STLVFVNNFA FGPTVDHQLK ERFADLRDGA RVVSSKSFCP LNFRITDRNL SDIGTIMHVS 300
  301 EIPPLKGSVS WTCKPVSYYL HVIDRTILER YFQRLKTKGG NDHESVGTVR TTRDRAKREA 360
  361 NVGQHHHNNH HSNNHANSNN HQRDREQSNG ATATAAHQQR HQSQSPANVS GAGIVLAASG 420
  421 QQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 175.0
Match: 1nw3A
Description: Catalytic, N-terminal domain of histone methyltransferase Dot1l
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.723277178398499 bayes_pls_golite062009
transferase activity 0.64512166557639 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.54403439349476 bayes_pls_golite062009
methyltransferase activity 0.54389223881989 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [423-648]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AASKTRQQLQ HQHNQQQRSL DMESSTESDG DATNGNGGNT TTATNTTSAS NGPMTRKVWS  60
   61 DWCSSKGKSS QSDDEENNNS NSNGGSNGGS IGGGSVGRQA RATTQKKRKK LTRKAAIASK 120
  121 SAAAAQREAE AAAAAAVSVP SKESSSKEDP PRAASAGPGR KGRMKKGARG RKSLKIVGLE 180
  181 ALHKQTVLST SLDTMTKKLP AAPGTVDQQL TALLTENMSH AELDIP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [649-806]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TAPQDTPYAL QILLDVFRSQ YTSMIEHMKS SAYVPQVQKQ IAQEQERMAR LKNRASQLDK  60
   61 QIKVLIDDSV ALLKVRMNEL GIHVNSPNDL IAQAKEIVGR HKDLQHTASR MRNEVTFYEG 120
  121 EQKLLLNKQL KNLPEYQKLC GTVNGKVKLE VPPELSET

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.29
Match: 1mqlB
Description: BHA of Ukr/63
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [807-1573]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TAQELVLKEI ANTLSQRKKL YAQVSTIEQE TSVLQKTAEE RSTAATLLAQ GTNMIVSTGS  60
   61 SSSSSTTVCA SAVTAQSNKL NSVKNSRRNR EHRARSQEWP EVPEVGKIQE SNPEVLAQKI 120
  121 VETCRQIEAG KFQGAGAPSS QVNGKNKAII EVPPPPATAP VSIKSSPGHH YKDTTLMPAP 180
  181 KQQQQQQMTL SQLPKCELPG LSTSRKQESP KVANFEDRLK SIITTALNED QEQRSKAVES 240
  241 SPSPSPLHSP APKRSKQHPA GAINPAQSLP NNLHNIITVS TQGLMHLNAN TTISPITPPL 300
  301 PGPGAGATAS TAPPPPANLP YGAYGGAVAK TTISGKYQAA KEPKYSPVRQ APLPPPPSHM 360
  361 ASLYPAGQQT TPADLGYQRR RSSVSATSYE HYMVQQQQQL QQQQLMLAAA AHAAQRQQMR 420
  421 VEEQQQQQQH QHHHHHHHHH PQHRLPQHVQ HQHPHQHHPN EFKAPPADSH LQRSSSREQL 480
  481 IVEPPQTQPL ELLPRASSAN SDYSGYRIRP PSRPSSNSSQ PDYTQVSPAK MALRRHLSQE 540
  541 KLSQHVTPQA TPPLPGHGGA PTSGKTIGDL VNGEIERTLE ISHQSIINAA VNMSTSGASF 600
  601 MERAFLNERS NDRLLINLNA QRPERVHVRP LSEESQDPQP TSYAQERGPG LGAGGAAAGG 660
  661 NSNLATLAHV AYAQKAQGGA RANAGTAPPA THSSSARSGR DYQPVALPRA ELKGSIEAYF 720
  721 HEEQQQKQSK GAGSAGSSSL RGPRLNGANP PLEGKLPLVF VRRAWTF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.39794
Match: 1y0fA
Description: No description for 1y0fA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle