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View Structure Prediction Details

Protein: CG31367-PA, FBpp...
Organism: Drosophila melanogaster
Length: 397 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG31367-PA, FBpp....

Description E-value Query
Range
Subject
Range
gi|7549210 - gi|7549210|gb|AAF63787.1|AF142406_1 200 kDa antigen p200 [Babesia bigemina]
174.0 [0..4] [397..329]

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Predicted Domain #1
Region A:
Residues: [1-294]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRERHDIER HTRWYDIKKK FESDPRYRMV DSMYREEYFE DYLHIMKEEK RKEREMREQR  60
   61 ERERHRELKS DRKEKDKEKD KGRKDRGRSR SKDKDREHKS SKEKDKDKEE KSKSEKSKKR 120
  121 DTTPEEGEHR EESEREERAG SDDSEVARQR ENEAEQKQKE REKKLRVEQS IREREKEVQR 180
  181 TLAGHLRDRD KEREHHMREE CIGHFTALLT DLVRTPDFTW KEVKRQLRKD HRWELIESLD 240
  241 REDRERKFNE HIDNLMKKKR ERFREMLDEI STLQLTSTWK EIKKLIKEDP RYLK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.69897
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [295-397]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YNSDKGEREF RDYIKDKTMT AKTSLRELLQ ECKFITHKSS DLIKENPNHL KEIQDILKND  60
   61 KRYLVLDHME EERNTIVLGF LEELNKRGPP PPPTASESTR RNK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.35
Match: 2e71A
Description: No description for 2e71A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle