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View Structure Prediction Details

Protein: Obp83g-PA
Organism: Drosophila melanogaster
Length: 146 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Obp83g-PA.

Description E-value Query
Range
Subject
Range
gi|125773007|ref... - GA14801-PA [Drosophila pseudoobscura], GA14801 [Drosophila pseudoobscura pseudoobscura]
gi|54637494, gi|... - gi|54637494|gb|EAL26896.1| GA14801 [Drosophila pseudoobscura pseudoobscura], gi|125773007|ref|XP_001...
gi|195158829, gi... - gi|195158829|ref|XP_002020287.1| GL13898 [Drosophila persimilis], gi|194117056|gb|EDW39099.1| GL1389...
122.0 [0..10] [146..3]

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Predicted Domain #1
Region A:
Residues: [1-146]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSQSLLLIV AAVATFLVAQ TTAKFLLKDH ADAEKAFEEC REDYYVPDDI YEKYLNYEFP  60
   61 AHRRTSCFVK CFLEKLELFS EKKGFDERAM IAQFTSKSSK DLSTVQHGLE KCIDHNEAES 120
  121 DVCTWANRVF SCWLPINRHV VRKVFA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.0
Match: 1dqeA
Description: Pheromone binding protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
odorant binding 6.54639467875661 bayes_pls_golite062009
pheromone binding 4.60846885062367 bayes_pls_golite062009
phenylalkylamine binding 3.4460817037949 bayes_pls_golite062009
binding 1.84061726818261 bayes_pls_golite062009
phthalate binding 1.38176480531195 bayes_pls_golite062009
diphenyl phthalate binding 1.38176480531195 bayes_pls_golite062009
dibutyl phthalate binding 1.38176480531195 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle