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View Structure Prediction Details

Protein: Or83c-PA
Organism: Drosophila melanogaster
Length: 397 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Or83c-PA.

Description E-value Query
Range
Subject
Range
gi|31232819, gi|... - gi|31232819|ref|XP_318764.1| candidate odorant receptor (AGAP009707-PA) [Anopheles gambiae str. PEST...
AGAP009707-PA - Or71: odorant receptor (Or71)|protein_coding|3R:39220352:39223844:1|gene:AGAP009707
195.0 [0..8] [395..4]

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Predicted Domain #1
Region A:
Residues: [1-110]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSESPSSR FRELSKYINS LTNLLGVDFL SPKLKFNYRT WTTIFAIANY TGFTVFTILN  60
   61 NGGDWRVGLK ASLMTGGLFH GLGKFLTCLL KHQDMRRLVL YSQSIYDEYE 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [111-243]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TRGDSYHRTL NSNIDRLLGI MKIIRNGYVF AFCLMELLPL AMLMYDGTRV TAMQYLIPGL  60
   61 PLENNYCYVV TYMIQTVTML VQGVGFYSGD LFVFLGLTQI LTFADMLQVK VKELNDALEQ 120
  121 KAEYRALVRV GAS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [244-397]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IDGAENRQRL LLDVIRWHQL FTDYCRAINA LYYELIATQV LSMALAMMLS FCINLSSFHM  60
   61 PSAIFFVVSA YSMSIYCILG TILEFAYDQV YESICNVTWY ELSGEQRKLF GFLLRESQYP 120
  121 HNIQILGVMS LSVRTALQIV KLIYSVSMMM MNRA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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