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View Structure Prediction Details

Protein: gi|23170404, gi|...
Organism: Drosophila melanogaster
Length: 732 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|23170404, gi|....

Description E-value Query
Range
Subject
Range
plx-PA - The gene pollux is referred to in FlyBase by the symbol Dmel\plx (CG42612, FBgn0261261). It is a pro...
442.0 [0..1] [732..648]

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Predicted Domain #1
Region A:
Residues: [1-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKPAKRGKR DAAELRELWR TAIRQTIMLN RMETENAMLQ ARQNENELKR IKLDYEEIVP  60
   61 CDKQLIERWE QIIERNSTQI GNKKDPKVLG HAIRTGVPRS KRGDVWTFLA EQHSMNTAPV 120
  121 DTKRFPNFNT PYHMLLKHLT EHQHAIFIDL GRTFPNHQFY KDPLGLGQLS LFNLLKAYSI 180
  181 LDPELGYCQG LGFICGVLLL HCDEANSFQL LKHLMFRRNM RTKYLPDMKK FQLQLYQLSR 240
  241 LVKDHLPDLY VWLDQNDVSP TLYAAPWILT VFSSQFPLGF VARVFDLLFL ESSDVIFKFA 300
  301 IALLSVHKQQ LLAKDNFEEI MDYLKTVVPK MEHTCMEQIM KLVFSM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.522879
Match: 2qq8A
Description: No description for 2qq8A was found.

Predicted Domain #2
Region A:
Residues: [347-732]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DIGKQLAEYK VEYNVLQEEI TTTNHHLEML NREKTQNQHL EQQLQFAQSS IAQLETTRSS  60
   61 QQAQITTLQS QVQSLELTIQ TLGRYVGQLV EHNPDLELPN EVRRMLQQLD DLDRQRRKPI 120
  121 FTERKIGKSV SVNSHLGFPL KVLEELTERD ELGSPQKQKK EKTPFFEQLR QQQQQHRLNG 180
  181 GGQSSNVGES GSPTPPSRPN RLLDNASART VMQVKLDELK LPEHVDKFVA NIKSPLEVDS 240
  241 GVGTPLSPPS TASNSSGGSI FSRMGYRTTP PALSPLAQRQ SYGVAITTAP CPQHMEEVAP 300
  301 ATTMAVMPQE DVEEPQPMHP LSMVGGDVNV RFKGTTQLKS IRPVHHMRAI PLGGVQHPSS 360
  361 TEPAVRVAPV PVELAPPAAT ATTGRS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.25
Match: 1deqA
Description: Fibrinogen
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle