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View Structure Prediction Details

Protein: gi|28571519, gi|...
Organism: Drosophila melanogaster
Length: 412 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|28571519, gi|....

Description E-value Query
Range
Subject
Range
gi|125776657, gi... - gi|54639091|gb|EAL28493.1| GA11785-PA [Drosophila pseudoobscura], gi|125776657|ref|XP_001359348.1| G...
316.0 [0..7] [412..2]

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Predicted Domain #1
Region A:
Residues: [1-164]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDSCTADLR SRRRENPIDR NGNIGGTGKE QATSTRPKLT TEYTQRTNEM TASKEGQESR  60
   61 RTLSDSSAED VRNTGSRTRT NDDEMWRNEL AMNTDSSSVQ PEKREERSHR TGNSNAKLSD 120
  121 AVDVVLRVLL VITFFKLETM TAFKREIHEE ELWLYKNPRR PDIV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [165-412]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RGGELLFWVI VAPFLVTIAF YWYTRDRRDF RAASWAWTLA LCMNGIPTSV LKITVGRPRP  60
   61 DYFYRCFPDG VMVLNTTSNG VDTSILDFNC TGLPGDINEG RKSFPSGHSS FAFASFGFIA 120
  121 YYIGAKLHAF DSRGRGHTWR LCIAVIPLFI ALLVAVSRTC DYHHHWQDVT IGGLIGLFAG 180
  181 YISYTQYYPS IFCPDAGIPL VRWPSREGSQ YQRLSGKDDN GSRGPHHLDG GDAVRRPLLA 240
  241 DKEESKWY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.0
Match: 2akcA
Description: No description for 2akcA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle