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View Structure Prediction Details

Protein: CG12746-PD, CG12...
Organism: Drosophila melanogaster
Length: 363 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG12746-PD, CG12....

Description E-value Query
Range
Subject
Range
gi|28571519, gi|... - gi|28571519|ref|NP_649551.3| CG12746-PC, isoform C [Drosophila melanogaster], gi|28381091|gb|AAN1324...
299.0 [0..1] [363..50]

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Predicted Domain #1
Region A:
Residues: [1-140]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTASKEGQES RRTLSDSSAE DVRNTGSRTR TNDDEMWRNE LAMNTDSSSV QPEKREERSH  60
   61 RTGNSNAKLS DAVDVVLRVL LVITFFKLET MTAFKREIHE EELWLYKNPR RPDIVRGGEL 120
  121 LFWVIVAPFL VTIAFYWYTR 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [141-363]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DRRDFRAASW AWTLALCMNG IPTSVLKITV GRPRPDYFYR CFPDGVMVLN TTSNGVDTSI  60
   61 LDFNCTGLPG DINEGRKSFP SGHSSFAFAS FGFIAYYIGA KLHAFDSRGR GHTWRLCIAV 120
  121 IPLFIALLVA VSRTCDYHHH WQDVTIGGLI GLFAGYISYT QYYPSIFCPD AGIPLVRWPS 180
  181 REGSQYQRLS GKDDNGSRGP HHLDGGDAVR RPLLADKEES KWY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.522879
Match: 2akcA
Description: No description for 2akcA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle