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View Structure Prediction Details

Protein: Or83a-PA
Organism: Drosophila melanogaster
Length: 453 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Or83a-PA.

Description E-value Query
Range
Subject
Range
gi|54639110, gi|... - gi|54639110|gb|EAL28512.1| GA10437-PA [Drosophila pseudoobscura], gi|125776711|ref|XP_001359366.1| G...
219.0 [0..9] [452..1]

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Predicted Domain #1
Region A:
Residues: [1-131]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSTFKEERI KDDSKRRDLF VFVRQTMCIA AMYPFGYYVN GSGVLAVLVR FCDLTYELFN  60
   61 YFVSVHIAGL YICTIYINYG QGDLDFFVNC LIQTIIYLWT IAMKLYFRRF RPGLLNTILS 120
  121 NINDEYETRS A

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [132-244]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VGFSFVTMAG SYRMSKLWIK TYVYCCYIGT IFWLALPIAY RDRSLPLACW YPFDYTQPGV  60
   61 YEVVFLLQAM GQIQVAASFA SSSGLHMVLC VLISGQYDVL FCSLKNVLAS SYV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [245-453]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LMGANMTELN QLQAEQSAAD VEPGQYAYSV EEETPLQELL KVGSSMDFSS AFRLSFVRCI  60
   61 QHHRYIVAAL KKIESFYSPI WFVKIGEVTF LMCLVAFVST KSTAANSFMR MVSLGQYLLL 120
  121 VLYELFIICY FADIVFQNSQ RCGEALWRSP WQRHLKDVRS DYMFFMLNSR RQFQLTAGKI 180
  181 SNLNVDRFRG TITTAFSFLT LLQKMDARE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle