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View Structure Prediction Details

Protein: CG16708-PA, CG16...
Organism: Drosophila melanogaster
Length: 687 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG16708-PA, CG16....

Description E-value Query
Range
Subject
Range
gi|125776794|ref... - GA14094-PA [Drosophila pseudoobscura], GA14094 [Drosophila pseudoobscura pseudoobscura]
gi|125776794, gi... - gi|54639139|gb|EAL28541.1| GA14094 [Drosophila pseudoobscura pseudoobscura], gi|125776794|ref|XP_001...
452.0 [0..1] [687..1]

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Predicted Domain #1
Region A:
Residues: [1-202]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQTKQPAGR SSTSAGDFVA PISSTSASKF TPCSASDHNV LLNNFQLKKK SYRVLLHGQQ  60
   61 LVWERLQKIK QSPQGNEAKA PLPPDSPAQP GGICSYGPQS HVLHLDDVVS IRSGDTKASS 120
  121 LKPPSPPGSE RSSGCSGDVA QGKPTSQYLT INYAMRLSKS QTDCNRWELR RLTFFNSDPY 180
  181 IVRQWDQELQ IRLHSSSPTR MR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [203-510]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VRRLLVFINP YGGRKAGAQT YERHVRPIFQ LAGVDATCIT TQRANQVKDI LLSHDLGVYD  60
   61 AVCCVGGDGT VAEVINGLIF RQMRELGLDE QRPPYIPRPA LPVGVIPAGS TDTIAYSMHG 120
  121 TADVRTAAIH VILGQHRGLD VCSVSNGQSL LRFCASVLSY GYLGDVAAQS ENYRWMGPRR 180
  181 YEYSGVKAFL NNRGYDAELR MLEEPDLLLT TPLEDIPQSP DSVCSLGESV PSVCYANCQR 240
  241 CSFASSIQEQ RSSLFIQEES KEAERNQQVE TEDSHLAASE AALLRPRPRP GNLRLPTGSI 300
  301 SSMRNLGN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.154902
Match: 2jgrA
Description: No description for 2jgrA was found.

Predicted functions:

Term Confidence Notes
catalytic activity 0.33446102778142 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [511-687]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DQWKVVRGNF FMICGANITC ACARSPNGIS RYSHLGDGCL DLILVKKTSL LNNVRFLLNT  60
   61 AGRSGDIRNL PFVEVYRTRE FRFRTFSASE EDYSLAGSCQ PITPPEEMTA HSSSTEFSSW 120
  121 NCDGEVVTDL DITMRSHCQL IEVFMRGPHS YSKPLKGGTT PTTPASSSDN VYCCCKD

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.01
Match: 2bonA
Description: No description for 2bonA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle