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View Structure Prediction Details

Protein: retinophilin-PB
Organism: Drosophila melanogaster
Length: 118 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for retinophilin-PB.

Description E-value Query
Range
Subject
Range
gi|157873499 - gi|157873499|ref|XP_001685258.1| phosphatidylinositol-4-phosphate 5-kinase-like protein [Leishmania ...
gi|68128329 - gi|68128329|emb|CAJ08497.1| phosphatidylinositol-4-phosphate 5-kinase-like protein [Leishmania major...
144.0 [0..2] [115..60]

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Predicted Domain #1
Region A:
Residues: [1-118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMDDYDDDM SSVGVTTARI ENQHQQHPHQ QGQHGHHQQG QGQSQYSAGA VKVGGWRYED  60
   61 ASRYIGEWNQ RGQKHGIGHL QFADGTRYDG QFQEGLSQGV GCLWFADGAK SVSIILVM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.30103
Match: 1mt6A
Description: Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain; Histone H3 K4-specific methyltransferase SET7/9 catalytic domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle