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View Structure Prediction Details

Protein: retinophilin-PA
Organism: Drosophila melanogaster
Length: 198 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for retinophilin-PA.

Description E-value Query
Range
Subject
Range
gi|125584193, gi... - gi|51964552|ref|XP_507061.1| PREDICTED OJ1119_A01.20-1 gene product [Oryza sativa (japonica cultivar...
178.0 [0..5] [177..83]
gi|240255960, gi... - gi|27764944|gb|AAO23593.1| At4g17080/dl4570w [Arabidopsis thaliana], gi|240255960|ref|NP_193441.5| u...
176.0 [0..4] [194..255]
gi|8885992 - gi|8885992|gb|AAF80332.1|AF157047_1 putative phosphatidylinositol 4-phosphate 5-kinase [Nicotiana ru...
171.0 [0..5] [177..101]

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Predicted Domain #1
Region A:
Residues: [1-198]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMDDYDDDM SSVGVTTARI ENQHQQHPHQ QGQHGHHQQG QGQSQYSAGA VKVGGWRYED  60
   61 ASRYIGEWNQ RGQKHGIGHL QFADGTRYDG QFQEGLSQGV GCLWFADGAK YEGEFHQGWF 120
  121 HGNGIFWRAD GMKYEGEFRG GKIWGLGLLT FQDFTHGFPR NEGFFQDCRF MRRRRCPEVV 180
  181 QRAQKCALMA RSQCEHPY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.69897
Match: 1h3iA
Description: Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain; Histone H3 K4-specific methyltransferase SET7/9 catalytic domain
Matching Structure (courtesy of the PDB):

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