YRC Public Data Repository - Protein Structure Prediction

Protein:	CG14645-PA
Organism:	Drosophila melanogaster
Length:	97 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG14645-PA.

Description	E-value	Query Range	Subject Range
gi\|33328977 - gi\|33328977\|gb\|AAQ09895.1\| CG14645 [Drosophila yakuba]	144.0	[0..3]	[97..1]
gi\|24266646 - gi\|24266646\|gb\|AAN52276.1\|AF468865_1 Pro1 [Glossina morsitans morsitans]	120.0	[0..1]	[95..1]
gi\|54639360, gi\|... - gi\|54639360\|gb\|EAL28762.1\| GA13143 [Drosophila pseudoobscura pseudoobscura], gi\|125777455\|ref\|XP_001... gi\|125777455\|ref... - GA13143-PA [Drosophila pseudoobscura], GA13143 [Drosophila pseudoobscura pseudoobscura] gi\|195156812, gi... - gi\|195156812\|ref\|XP_002019290.1\| GL12319 [Drosophila persimilis], gi\|194115881\|gb\|EDW37924.1\| GL1231...	117.0	[0..1]	[97..1]
gi\|220956978, gi... - gi\|220956978\|gb\|ACL91032.1\| Peritrophin-15b-PA [synthetic construct], gi\|220947614\|gb\|ACL86350.1\| Pe... Peritrophin-15b-... - The gene Peritrophin-15b is referred to in FlyBase by the symbol Dmel\Peritrophin-15b (CG31893, FBgn...	116.0	[0..3]	[93..6]
gi\|116132489, gi... - gi\|118778655\|ref\|XP_308779.3\| AGAP006991-PA [Anopheles gambiae str. PEST], gi\|116132489\|gb\|EAA04414.... AGAP006991-PA - \|protein_coding\|2L:40497066:40497432:-1\|gene:AGAP006991	110.0	[0..14]	[94..19]
gi\|12657851 - gi\|12657851\|gb\|AAK01057.1\|AF327453_1 peritrophin-15 precursor [Chrysomya bezziana]	108.0	[0..1]	[89..1]

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Predicted Domain #1

Region A:
Residues: [1-97]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVQLALTSL LVISFGIALA YDGDGQPGCK TQAELDIVVF RNNWDATSYW KCETLNKPAI  60
   61 EIKCPSETGF MDSLKNCVNW EEWEWEKPVE PLSEADQ

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	2.2
Match:	1dqcA
Description:	Tachycitin
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits