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View Structure Prediction Details

Protein: FBpp0307588, Syt...
Organism: Drosophila melanogaster
Length: 586 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0307588, Syt....

Description E-value Query
Range
Subject
Range
gi|125777465, gi... - gi|54639363|gb|EAL28765.1| GA22029-PA [Drosophila pseudoobscura], gi|125777465|ref|XP_001359615.1| G...
324.0 [0..1] [586..1]

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Predicted Domain #1
Region A:
Residues: [1-151]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVTSASGLD STPTLGTIEV TTLLGAFFGV LVLLLLLFLF ISRKCCFHYR HAINCCDERH  60
   61 LAVKCVQKIT RKRRYENTSS DSEEDILRRL RWHQQHQLGE KPGGYGLGIS QANPLTAQSF 120
  121 NYHQAGASAD LQRVTVSRDP LAIAERGKVG I

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [152-217]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSSHSECSSN DSMEVSVDSH TGVLTGLSKA TTTVPHPATA FRNPCGEHRA KTQALRYQHR  60
   61 VNVAAP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [218-586]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKLDKERDNV LVVPMVNAYS INNNNNSITT SNNHPSSNNN DDEPLFDTSD LRSIKSDDLL  60
   61 VGVDQKEPAV QRGPIELELS LLYDAPMRKM TVHVMQAKNL PPLGSGQTTH TQVRMLMLPS 120
  121 KKQKLKTKIR SGENPQYMES FLLHRVNPED VNNMGLRVRL YGCERLRKER LIGEAYVSFA 180
  181 TVDLELETNL WLPLEPRNTS SGLGSTSDLL SLARSESAGS TSSMQHGGVS ELLLGLSYNG 240
  241 VTGRLSVEII KGSQFRSLSL NKAPDTYVKM VMVSSIGQEI SRAKTSIRRG QPNPLFKETF 300
  301 AFQVALFQLN DVTLMISVYA KRHMKKNEMV GWFSLGLNSS GSEEVAHWAD VCEMPKGEML 360
  361 ARWHVLVDS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.39794
Match: 1dqvA
Description: Synaptogamin I
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle