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View Structure Prediction Details

Protein: cpx-PX, cpx-PA, ...
Organism: Drosophila melanogaster
Length: 142 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cpx-PX, cpx-PA, ....

Description E-value Query
Range
Subject
Range
gi|109506723, gi... - gi|109507479|ref|XP_001065314.1| PREDICTED: similar to complexin 4 [Rattus norvegicus], gi|109506723...
133.0 [0..3] [141..112]

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Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAFIAKQMV GNQLSAVKGA VGGDGGDDGD DKEKAEEEER ERQEAIKEAE DRRKEKHRKM  60
   61 EEEREKMRQD IRDKYNIKKK EEIVEAAPQE EPNPLMRKKK TPEELAAEAE QEELDDFTKL 120
  121 KNQIETQVNE LKTQIEGKCV MQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.4
Match: 1rh1A
Description: crystal structure of the cytotoxic bacterial protein colicin B at 2.5 A resolution
Matching Structure (courtesy of the PDB):

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Created and Maintained by: Michael Riffle