YRC Public Data Repository - Protein Structure Prediction

Protein:	fln-PA, FBpp0304969
Organism:	Drosophila melanogaster
Length:	182 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fln-PA, FBpp0304969.

Description	E-value	Query Range	Subject Range
gi\|195496061, gi... - gi\|33328967\|gb\|AAQ09890.1\| fln [Drosophila yakuba], gi\|195496061\|ref\|XP_002095533.1\| fln [Drosophila...	323.0	[0..1]	[182..1]
gi\|55245633, gi\|... - gi\|58376329\|ref\|XP_308552.2\| ENSANGP00000016640 [Anopheles gambiae str. PEST], gi\|55245633\|gb\|EAA043...	185.0	[0..72]	[182..1]
gi\|157105256, gi... - gi\|157105256\|ref\|XP_001648786.1\| hypothetical protein AaeL_AAEL004249 [Aedes aegypti], gi\|108880130\|...	155.0	[0..65]	[182..18]
gi\|91093201 - gi\|91093201\|ref\|XP_969293.1\| PREDICTED: similar to flightin CG7445-PA [Tribolium castaneum]	129.0	[0..78]	[182..64]
gi\|81294725, gi\|... - gi\|81294725\|emb\|CAH17702.1\| flightin [Lethocerus indicus], gi\|58190220\|emb\|CAI46902.1\| flightin [Let...	103.0	[0..77]	[182..55]
gi\|110756978 - gi\|110756978\|ref\|XP_001121224.1\| PREDICTED: hypothetical protein [Apis mellifera]	67.0	[0..84]	[182..55]

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Predicted Domain #1

Region A:
Residues: [1-182]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADEEDPWGF DDGGEEEKAA STQAGTPAPP SKAPSVASDH KADSVVAGTP ANEEAAPEEV  60
   61 EEIKAPPPPP EDDGYRKPVQ LYRHWVRPKF LQYKYMYNYR TNYYDDVIDY IDKKQTGVAR 120
  121 EIPRPQTWAE RVLRTRNISG SDIDSYAPAK RDKQLIQTLA ASIRTYNYHT KAYINQRYAS 180
  181 VL

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits