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View Structure Prediction Details

Protein: Sgs8-PA
Organism: Drosophila melanogaster
Length: 75 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Sgs8-PA.

Description E-value Query
Range
Subject
Range
gi|603987 - gi|603987|emb|CAA25992.1| salivary gland glue protein [Drosophila melanogaster]
103.0 [0..1] [75..1]
SGS3_DROER - Salivary glue protein Sgs-3 OS=Drosophila erecta GN=Sgs3 PE=2 SV=2
98.0 [0..25] [75..278]
SGS3_DROYA - Salivary glue protein Sgs-3 OS=Drosophila yakuba GN=Sgs3 PE=2 SV=2
77.0 [0..27] [75..215]
SGS3_DROSI - Salivary glue protein Sgs-3 OS=Drosophila simulans GN=Sgs3 PE=2 SV=2
76.0 [0..27] [75..169]
gi|450903, gi|28... - gi|450903|emb|CAA82672.1| glue protein [Drosophila virilis], gi|433482|emb|CAA53796.1| major larval ...
73.0 [0..27] [75..183]
gi|54640898, gi|... - gi|54640898|gb|EAL29649.1| GA11160-PA [Drosophila pseudoobscura], gi|125979761|ref|XP_001353913.1| G...
63.0 [0..26] [75..240]

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Predicted Domain #1
Region A:
Residues: [1-75]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLVVAVIA CIMLIGFADP ASGCKDCSCV ICGPGGEPCP GCSARVPVCK DLINIMEGLE  60
   61 RQVRQCACGE QVWLF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.274 a.4.1 Homeodomain-like
View Download 0.253 a.16.1 S15/NS1 RNA-binding domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle