YRC Public Data Repository - Protein Structure Prediction

Protein:	FBpp0301282, Hsp...
Organism:	Drosophila melanogaster
Length:	186 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0301282, Hsp....

Description	E-value	Query Range	Subject Range
gi\|71489 - gi\|71489\|pir\|\|HHFF23 heat shock protein 23 - fruit fly (Drosophila melanogaster)	165.0	[0..1]	[186..1]
gi\|54642612\|gb\|E... - GA18202-PA [Drosophila pseudoobscura], GA18202 [Drosophila pseudoobscura pseudoobscura] gi\|54642612, gi\|... - gi\|54642612\|gb\|EAL31359.1\| GA18202 [Drosophila pseudoobscura pseudoobscura], gi\|125980566\|ref\|XP_001...	156.0	[0..1]	[186..1]
gi\|8671873 - gi\|8671873\|gb\|AAF78436.1\|AC018748_15 Contains similarity to 17.6 KD class I heat shock protein from ...	136.0	[0..17]	[158..247]
gi\|115299195 - gi\|115299195\|gb\|ABI93622.1\| alphaAins-crystallin [Cavia porcellus]	129.0	[0..7]	[166..19]
CRYAA_MOUSE - Alpha-crystallin A chain OS=Mus musculus GN=Cryaa PE=2 SV=1	128.0	[0..7]	[166..19]
gi\|15928913 - gi\|15928913\|gb\|AAH14920.1\|AAH14920 Unknown (protein for IMAGE:3906970) [Homo sapiens]	128.0	[0..2]	[175..6]
CRYAA_MESAU - Alpha-crystallin A chain OS=Mesocricetus auratus GN=CRYAA PE=1 SV=1	128.0	[0..7]	[166..19]
gi\|118786650, gi... - gi\|118786650\|ref\|XP_315550.3\| ENSANGP00000018811 [Anopheles gambiae str. PEST], gi\|116126424\|gb\|EAA1...	128.0	[0..3]	[185..17]
gi\|224545 - gi\|224545\|prf\|\|1107298A protein,small heat shock	128.0	[0..17]	[158..1]

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Predicted Domain #1

Region A:
Residues: [1-186]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANIPLLLSL ADDLGRMSMV PFYEPYYCQR QRNPYLALVG PMEQQLRQLE KQVGASSGSS  60
   61 GAVSKIGKDG FQVCMDVSHF KPSELVVKVQ DNSVLVEGNH EEREDDHGFI TRHFVRRYAL 120
  121 PPGYEADKVA STLSSDGVLT IKVPKPPAIE DKGNERIVQI QQVGPAHLNV KENPKEAVEQ 180
  181 DNGNDK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	13.522879
Match:	2bolA
Description:	CRYSTAL STRUCTURE AND ASSEMBLY OF TSP36, A METAZOAN SMALL HEAT SHOCK PROTEIN
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits