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View Structure Prediction Details

Protein: CG13670-PA
Organism: Drosophila melanogaster
Length: 266 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG13670-PA.

Description E-value Query
Range
Subject
Range
gi|23957740, gi|... - gi|23957740|ref|NP_705854.1| hypothetical protein [Plasmodium falciparum 3D7], gi|15375392|emb|CAB39...
132.0 [0..92] [264..345]
gi|66564779 - gi|66564779|ref|XP_624729.1| PREDICTED: similar to CG1259-PB [Apis mellifera]
125.0 [0..48] [164..167]
gi|112983758, gi... - gi|12862591|dbj|BAB32481.1| cuticle protein [Bombyx mori], gi|112983758|ref|NP_001036866.1| cuticle ...
120.0 [0..38] [197..17]
gi|58378630, gi|... - gi|58378630|ref|XP_308909.2| cuticular protein 55, RR-2 family (AGAP006837-PA) [Anopheles gambiae st...
AGAP006837-PA - CPR55: cuticular protein RR-1 family (CPR55)|protein_coding|2L:39151550:39152078:1|gene:AGAP006837
117.0 [0..50] [191..4]
gi|108882505, gi... - gi|157126718|ref|XP_001654719.1| cuticle protein, putative [Aedes aegypti], gi|108882505|gb|EAT46730...
114.0 [0..49] [176..1]
gi|21464360 - gi|21464360|gb|AAM51983.1| RE04513p [Drosophila melanogaster]
114.0 [0..34] [163..1]

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Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKRRITSTA GDANGPGVGP KARTSTRWRF RIALRREARF GQAVRQLKDL LPLLALIAGC  60
   61 GMIGACAAVG YSYARFEGPV 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [81-167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VGPEHLVTVH DGRTVDYVAR PEYSFAYGVE DGKTRVLQNR KETRNGDEVR GVYSVVDPDG  60
   61 TLRVVKYTAD DANGFQAEVI TNGVKTL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 27.60206
Match: PF00379.14
Description: No description for PF00379.14 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.867 N/A N/A d.17.1 Cystatin/monellin

Predicted Domain #3
Region A:
Residues: [168-266]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HGHGSDGDAG GGSVDSQVRH HSAEAHKAKE DDEEEDERER EHQGNGQYQV HEDYDEGKDE  60
   61 QAEEDEEGGG HQEYEGSSEE GYVEADAHSQ QEESSDEDY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle