YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG13712-PA
Organism: Drosophila melanogaster
Length: 117 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG13712-PA.

Description E-value Query
Range
Subject
Range
gi|54641407, gi|... - gi|54641407|gb|EAL30157.1| GA12477-PA [Drosophila pseudoobscura], gi|125977252|ref|XP_001352659.1| G...
86.0 [0..14] [117..1]

Back

Predicted Domain #1
Region A:
Residues: [1-117]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDYSSYSNC SGNSQRREQS VSYALYLHRR ELGRPRRKMM RIASTKLQLT NELIQLQQRR  60
   61 QWESAFELEF DAEASSQQMS ALDREREYRD RLRTNMQRQL EKQQKRKRKY LEEIGKL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 45.958607
Match: PF05306.2
Description: No description for PF05306.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.925 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle