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View Structure Prediction Details

Protein: CG13713-PA
Organism: Drosophila melanogaster
Length: 99 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG13713-PA.

Description E-value Query
Range
Subject
Range
halo-PA - The gene halo is referred to in FlyBase by the symbol Dmel\halo (CG7428, FBgn0001174). It is a prote...
111.0 [0..1] [81..50]
gi|54645360, gi|... - gi|54645360|gb|EAL34100.1| GA20343-PA [Drosophila pseudoobscura], gi|125986541|ref|XP_001357034.1| G...
104.0 [0..1] [81..12]
gi|33329019 - gi|33329019|gb|AAQ09916.1| CG14112 [Drosophila yakuba]
90.0 [0..3] [81..19]

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Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQEKMLKPT VTYHLFLYRV ELARRNARQL RLSRTKIEIT DELISNTVRN LKTCSLDDLK  60
   61 AVNRELLFKR KLRSNVSKLK KEGMRQQRQE NQDNSAKQD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 45.721246
Match: PF05306.2
Description: No description for PF05306.2 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.759 N/A N/A a.7.14 Description not found.
View Download 0.618 N/A N/A a.2.3 Chaperone J-domain
View Download 0.612 N/A N/A a.253.1 Description not found.
View Download 0.590 N/A N/A a.7.16 Description not found.
View Download 0.579 N/A N/A a.7.8 GAT domain
View Download 0.574 N/A N/A a.21.1 HMG-box
View Download 0.548 N/A N/A a.2.7 tRNA-binding arm
View Download 0.517 N/A N/A f.18.1 F1F0 ATP synthase subunit A
View Download 0.462 N/A N/A a.24.9 alpha-catenin/vinculin
View Download 0.461 N/A N/A a.21.1 HMG-box


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle