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View Structure Prediction Details

Protein: CG15876-PA
Organism: Drosophila melanogaster
Length: 138 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG15876-PA.

Description E-value Query
Range
Subject
Range
gi|54641405, gi|... - gi|54641405|gb|EAL30155.1| GA13997 [Drosophila pseudoobscura pseudoobscura], gi|125977248|ref|XP_001...
gi|125977248|ref... - GA13997-PA [Drosophila pseudoobscura], GA13997 [Drosophila pseudoobscura pseudoobscura]
131.0 [0..1] [138..1]
CG13711-PA - This gene is referred to in FlyBase by the symbol Dmel\CG13711 (CG13711, FBgn0035572). It is a prote...
121.0 [0..12] [104..33]
gi|33329019 - gi|33329019|gb|AAQ09916.1| CG14112 [Drosophila yakuba]
102.0 [0..10] [94..19]

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Predicted Domain #1
Region A:
Residues: [1-138]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAQRNNANH RRGARPSVGY LLFQYQSELT RRHAEPTRLS RTKIHIIDGL VSRTIRHMKH  60
   61 CSMEDLRACK RELVYKEQLR DQLKNMRRKR SSSVNKVDAS ANTSAPVVSV KAPCTPPKPR 120
  121 SSTGEFSKMD IFGPEIFV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 45.455932
Match: PF05306.2
Description: No description for PF05306.2 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.872 N/A N/A a.24.9 alpha-catenin/vinculin
View Download 0.856 N/A N/A a.24.9 alpha-catenin/vinculin
View Download 0.828 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.828 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.827 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.827 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.814 N/A N/A a.24.14 FAT domain of focal adhesion kinase
View Download 0.814 N/A N/A a.24.14 FAT domain of focal adhesion kinase
View Download 0.748 N/A N/A a.48.1 N-terminal domain of cbl (N-cbl)
View Download 0.639 N/A N/A a.24.3 Cytochromes


YRC Informatics Platform - Version 3.0
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