YRC Public Data Repository - Protein Structure Prediction

Protein:	PHGPx-PA
Organism:	Drosophila melanogaster
Length:	169 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PHGPx-PA.

Description	E-value	Query Range	Subject Range
gi\|48374968, gi\|... - gi\|48374968\|gb\|AAT42166.1\| putative glutathione peroxidase [Sorghum bicolor], gi\|242073970\|ref\|XP_00...	161.0	[0..1]	[169..1]
GPX6_ARATH - Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial OS=Arabidopsis thaliana ...	160.0	[0..1]	[169..64]
gi\|21360380 - gi\|21360380\|gb\|AAM47493.1\| glutathione peroxidase 1 [Oryza sativa] gi\|115459848, gi... - gi\|222629338\|gb\|EEE61470.1\| hypothetical protein OsJ_15735 [Oryza sativa Japonica Group], gi\|2156930...	160.0	[0..1]	[169..1]
gi\|44663004 - gi\|44663004\|gb\|AAS47590.1\| phospholipid-hydroperoxide glutathione peroxidase [Setaria italica]	159.0	[0..1]	[169..1]
gi\|162458182, gi... - gi\|22268405\|gb\|AAM88847.2\|AF520911_1 putative glutathione peroxidase [Zea mays], gi\|162458182\|ref\|NP...	159.0	[0..1]	[169..1]
gi\|34334012 - gi\|34334012\|gb\|AAQ64633.1\| cytosolic glutathione peroxidase [Triticum monococcum]	157.0	[0..1]	[169..1]
GPX4_MESCR - Probable phospholipid hydroperoxide glutathione peroxidase OS=Mesembryanthemum crystallinum GN=GPXMC...	156.0	[0..1]	[169..1]
gi\|92894223 - gi\|92894223\|gb\|ABE92133.1\| Glutathione peroxidase [Medicago truncatula]	155.0	[0..1]	[169..103]

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Predicted Domain #1

Region A:
Residues: [1-169]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSANGDYKNA ASIYEFTVKD THGNDVSLEK YKGKVVLVVN IASKCGLTKN NYEKLTDLKE  60
   61 KYGERGLVIL NFPCNQFGSQ MPEADGEAMV CHLRDSKADI GEVFAKVDVN GDNAAPLYKY 120
  121 LKAKQTGTLG SGIKWNFTKF LVNKEGVPIN RYAPTTDPMD IAKDIEKLL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	34.221849
Match:	2p5qA
Description:	No description for 2p5qA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits