YRC Public Data Repository - Protein Structure Prediction

Protein:	FBpp0304919, Cpr...
Organism:	Drosophila melanogaster
Length:	180 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0304919, Cpr....

Description	E-value	Query Range	Subject Range
gi\|66564779 - gi\|66564779\|ref\|XP_624729.1\| PREDICTED: similar to CG1259-PB [Apis mellifera]	129.0	[0..9]	[175..179]
gi\|108882505, gi... - gi\|157126718\|ref\|XP_001654719.1\| cuticle protein, putative [Aedes aegypti], gi\|108882505\|gb\|EAT46730...	127.0	[0..1]	[127..1]
gi\|58378630, gi\|... - gi\|58378630\|ref\|XP_308909.2\| cuticular protein 55, RR-2 family (AGAP006837-PA) [Anopheles gambiae st... AGAP006837-PA - CPR55: cuticular protein RR-1 family (CPR55)\|protein_coding\|2L:39151550:39152078:1\|gene:AGAP006837	126.0	[0..2]	[141..3]
gi\|24660811, gi\|... - gi\|24660811\|ref\|NP_648208.1\| CG7072-PA [Drosophila melanogaster], gi\|23093945\|gb\|AAF50443.2\| CG7072-...	125.0	[0..4]	[115..41]
gi\|112983758, gi... - gi\|12862591\|dbj\|BAB32481.1\| cuticle protein [Bombyx mori], gi\|112983758\|ref\|NP_001036866.1\| cuticle ...	122.0	[0..21]	[136..47]
gi\|125776262, gi... - gi\|54638964\|gb\|EAL28366.1\| GA12160-PA [Drosophila pseudoobscura], gi\|125776262\|ref\|XP_001359221.1\| G...	119.0	[0..1]	[124..1]
gi\|91082113 - gi\|91082113\|ref\|XP_968054.1\| PREDICTED: similar to CG1919-PA [Tribolium castaneum]	117.0	[0..45]	[154..292]

Back

Predicted Domain #1

Region A:
Residues: [1-180]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFFKSLICL AVLSAASAGV LHGHGAGLYA AAPAIYAGHG HHDEGIDYHA YPKYHYNYGV  60
   61 ADSHTGDVKS QHEVRDGDVV KGSYSLVEPD GSVRTVEYTA DDHNGFNAVV HKTGPTVHHA 120
  121 APAVVAHAAP AVVHAAPAYA PAIAHHVAAA PAVPYAGSLA HQVPAYGYAT HNAHAHVAHY 180
  181

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	32.638272
Match:	PF00379.14
Description:	No description for PF00379.14 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits