| Protein: | CG13876-PA |
| Organism: | Drosophila melanogaster |
| Length: | 287 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG13876-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
401.0 | [0..3] | [259..4] |
|
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398.0 | [0..3] | [259..4] |
|
|
396.0 | [0..3] | [265..4] |
|
|
396.0 | [0..3] | [265..4] |
|
|
389.0 | [0..3] | [265..4] |
|
|
376.0 | [0..3] | [259..28] |
|
Region A: Residues: [1-100] |
1 11 21 31 41 51
| | | | | |
1 MMISDSQKKG LRELLLNDKN LTVLLQLAKG ATKNMCKTED PEEALRLITT HIPDIYVLLS 60
61 KRAIKKELLF TYLSNRRADA ATDFSKADLI AKVIQYWKQE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.526 | a.158.1 | F-box domain |
| View | Download | 0.492 | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.468 | a.118.8 | TPR-like |
| View | Download | 0.460 | d.112.1 | Phoshotransferase/anion transport protein |
| View | Download | 0.418 | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
|
Region A: Residues: [101-287] |
1 11 21 31 41 51
| | | | | |
1 HKSSIELSGD QTSSSLHIQS EEDYPIHTIA RKFGEWFFER FNADALSLVD LWADAALHLT 60
61 IIASDGINEW ECTTAAEVLS ALTSAKQQFD FYFNPNLTHA GIQGRMDSYG HFLVICCGTL 120
121 HSRDSCVGIF ECAFGLFRDP LADNNWKPKK VKCFLKSEAQ PPELHYLCSS ETLQTALELS 180
181 VPSDDLN
|
| Detection Method: | |
| Confidence: | 1.91 |
| Match: | 1zo2A |
| Description: | Structure of nuclear transport factor 2 (Ntf2) from Cryptosporidium parvum |
Matching Structure (courtesy of the PDB): |
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