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View Structure Prediction Details

Protein: Nplp1-PA
Organism: Drosophila melanogaster
Length: 309 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Nplp1-PA.

Description E-value Query
Range
Subject
Range
Nplp1-PB - The gene Neuropeptide-like precursor 1 is referred to in FlyBase by the symbol Dmel\Nplp1 (CG3441, F...
480.0 [0..1] [291..1]

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Predicted Domain #1
Region A:
Residues: [1-214]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQAVLQSAHS SRRLMLLLSM LLNAAIQPRS IIVSATDDVA NVSPCEMESL INQLMSPSPE  60
   61 YQLHASALRN QLKNLLRERQ LAVGEEQPLG EYPDYLEEDK RSVAALAAQG LLNAPKRSLA 120
  121 TLAKNGQLPT AEPGEDYGDA DSGEPSEQKR YIGSLARAGG LMTYGKRNVG TLARDFQLPI 180
  181 PNGKRNIATM ARLQSAPSTH RDPKRNVAAV ARYN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [215-309]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SQHGHIQRAG AEKRNLGALK SSPVHGVQQK REDEEMLLPA AAPDYADPMQ SYWWYPSYAG  60
   61 YADLDWNDYR RAEKRFLGRV LPPTRATAST HRSRL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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