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View Structure Prediction Details

Protein: FBpp0311729, uzip-PA
Organism: Drosophila melanogaster
Length: 488 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0311729, uzip-PA.

Description E-value Query
Range
Subject
Range
gi|54636320, gi|... - gi|54636320|gb|EAL25723.1| GA17506-PA [Drosophila pseudoobscura], gi|125809499|ref|XP_001361146.1| G...
551.0 [0..1] [478..1]

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Predicted Domain #1
Region A:
Residues: [1-223]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSNSCLISL GLLLVLIQIL APAKAAEHSV FTHKNASSVL GQLVTSSTLV WESYDPKDAT  60
   61 QLQFAVEGGK YVTEDEHYPM YVCRVPIDGI QVSGHTEKIL QRHVCLAAHY KHGKYDNFDV 120
  121 LMNKGHLGKV GWRHWRKFDA GVPVGAIRIG DDSYIGRHRA PSQPNKDGVV THWGADFNLG 180
  181 HLEPVGLGKI RVIEAEREKY YDDGEVLVET EPFRYELRDI KLD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [224-383]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RLRTDIQENM TELVTRKLEN LEDKYSTVET ILSYTFNYNQ YWGSHEGVAR GLPTKIFEKD  60
   61 EAVPAEINWA LKHTEKRSEN KAVHTKLWPG TAINVTLRGN YVTLEAPYSG KLFAFYYGSD 120
  121 ESVSRKISAE VRKSYLKEVK LEFSPVYWIE NGTLVPTTTT 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [384-488]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTTTSTSTTT HATTTSTNEP TPINEPPLVH MKDNGVQHSG PDTLEKTLHD SPSSNELNSH  60
   61 EAPENMSSDP GKDVALAGFG VNAAGSTFIA GSALLTLLLT IFLSL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle