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View Structure Prediction Details

Protein: ETH-PA
Organism: Drosophila melanogaster
Length: 203 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ETH-PA.

Description E-value Query
Range
Subject
Range
gi|6492332 - gi|6492332|gb|AAF14282.1|AF170922_1 ecdysis-triggering hormone precursor [Drosophila melanogaster]
421.0 [0..1] [203..1]
gi|125809683|ref... - GA14795-PA [Drosophila pseudoobscura], GA14795 [Drosophila pseudoobscura pseudoobscura]
gi|54636387, gi|... - gi|54636387|gb|EAL25790.1| GA14795 [Drosophila pseudoobscura pseudoobscura], gi|125809683|ref|XP_001...
291.0 [0..17] [203..17]
gi|118778551, gi... - gi|118778551|ref|XP_308702.2| ENSANGP00000023187 [Anopheles gambiae str. PEST], gi|116132439|gb|EAA4...
57.0 [0..25] [59..18]

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Predicted Domain #1
Region A:
Residues: [1-59]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIITVLSVS LLVGLVAISQ ADDSSPGFFL KITKNVPRLG KRGENFAIKN LKTIPRIGR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [60-203]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEHSSVTPLL AWLWDLETSP SKRRLPAGES PAKEQELNVV QPVNSNTLLE LLDNNAIPSE  60
   61 QVKFVHWKDF DRALQADADL YSKVIQLGRR PDQHLKQTLS FGSFVPIFGD EQNPDFMMYK 120
  121 NNEDQELYGG GNRYDRQFLK YNIL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle