YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: Eps-15-PB
Organism: Drosophila melanogaster
Length: 1232 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Eps-15-PB.

Description E-value Query
Range
Subject
Range
Eps-15-PA - The gene Epidermal growth factor receptor pathway substrate clone 15 is referred to in FlyBase by th...
500.0 [0..1] [1232..1]

Back

Predicted Domain #1
Region A:
Residues: [1-229]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVDFARVCG KHIGVYEAYY KLIDPKGTGA IEAMTAAKFL KKSGLSDVVL SRIWDLSDPS  60
   61 GKGFLDKPGF FVALKLVSLS QAGQVASMAN IYLDIANPPK LGELPKTMPS RIQTVPVASG 120
  121 GVANGDWSIG VIDRLKYEQL FESLHPSNGM LPGNKVKGVL MDSKLPMSIL GTIWDLADQD 180
  181 KDGNLDMHEF VVAMHLVYQT LQKRTIPSVL PPELRKPGGA GPPPKPAMP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.69897
Match: 2qptA
Description: No description for 2qptA was found.

Predicted Domain #2
Region A:
Residues: [230-600]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPPAGAAMPR APSGEGFGDG GFVANFPKDI APPAAIPPLP VAVPPMTRIP PVGAVSSQPL  60
   61 IQTDPLIPIG APVMANADWV VTPADLKRFE EIFRQSDLDK DGLVSGLEVK DIFIKSGIPQ 120
  121 RSLADIWALC DTNQSGKLTV EQFALAMWFV ERKQRGVDPP HVLNANMVPP SMRATVAGVD 180
  181 LQPQEVKPTY SNPELEMISK EIEELARERR VLETEIAQKE ADVRIKNGEV RSLQSELDTL 240
  241 TATLKQLENQ RGEAQKRLDD LQAQVTKIRD QCHMQEVTIN EQEGELNAKR SELQKLKDEE 300
  301 ASLQKEYDSN NRELSKLTNH LQATQLQISS VRSMVTQLLE TQRQMTDALL ICRAAMENQN 360
  361 AELVSEYQLK I

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.30103
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [601-673]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EPDFDEARKT LTKEVQLPKD DPFEENNSGA ANQATNGFGS DPFSGQPVNK PAISTGFDDS  60
   61 FNMSSGFDSG FDA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.69897
Match: 1c1gA
Description: Tropomyosin
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [674-834]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FGQSGAGSAF GQTQRDPFGS DAFAANKSNA ITPEPGKDDF GSDPFAALHA PTGQGQVLSP  60
   61 NAQKSGPPPR PESPSPALPP KKSKVPPPRP APPRAAQPTG GFGSGGGGGF ADFDDFDNKL 120
  121 HHIPSAPSPS ATALSPLPPT LPAPIPVVSG SSLLDSFTLF D

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [835-1119]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPGQIHKQAA STPNPTPITV PTVHTLLQTS LSTPAAPSPA LASLSTSGSG SVAGAGADLP  60
   61 SSVTITTAPS LNNQHLSRSN TPLQNQRTAD VKLETKAVVS VFDAFGEIGT RKAPTPSLIT 120
  121 GPTDFKDDPF KDYRYEDPFS IKDPFAEEGE EELSEGKGAD HKRNFAEDFS SGDEIGSAAK 180
  181 TLSNIVNNNS IKPKAATPLN NDLLQQFDAF NLNSSPAPSH HSGTSYHSNS KPSHDSQTAL 240
  241 DAFADFDDFA ATLATTGGSG AATTATTTGN TKLNNSFFDA FNDNF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [1120-1232]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVIQSSSVPT GVVRPNDQRA KAFDAFNDNF EDQFKTSPNA NFAKFDGFEA HNFSSDFGNA  60
   61 SFGTTGKEKQ NGQVDKKFQS KEPVKDKFAA DYSKPESFDA DLEEALKRSV LDN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle