YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: Eps-15-PC
Organism: Drosophila melanogaster
Length: 1106 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Eps-15-PC.

Description E-value Query
Range
Subject
Range
gi|125809724, gi... - gi|54636395|gb|EAL25798.1| GA14224-PA [Drosophila pseudoobscura], gi|125809724|ref|XP_001361220.1| G...
421.0 [0..1] [1106..1]

Back

Predicted Domain #1
Region A:
Residues: [1-217]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVDFARVCG KHIGVYEAYY KLIDPKGTGA IEAMTAAKFL KKSGLSDVVL SRIWDLSDPS  60
   61 GKGFLDKPGF FVALKLVSLS QAGQVASMAN IYLDIANPPK LGELPKTMPS RIQTVPVASG 120
  121 GVANGDWSIG VIDRLKYEQL FESLHPSNGM LPGNKVKGVL MDSKLPMSIL GTIWDLADQD 180
  181 KDGNLDMHEF VVAMHLVYQT LQKRTIPSVL PPELRKP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.522879
Match: 2qptA
Description: No description for 2qptA was found.

Predicted Domain #2
Region A:
Residues: [218-726]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGAGPPPKPA MPPPPAGAAM PRAPSGEGFG DGGFVANFPK DIAPPAAIPP LPVAVPPMTR  60
   61 IPPVGAVSSQ PLIQTDPLIP IGAPVMANAD WVVTPADLKR FEEIFRQSDL DKDGLVSGLE 120
  121 VKDIFIKSGI PQRSLADIWA LCDTNQSGKL TVEQFALAMW FVERKQRGVD PPHVLNANMV 180
  181 PPSMRATVAG VDLQPQEVKP TYSNPELEMI SKEIEELARE RRVLETEIAQ KEADVRIKNG 240
  241 EVRSLQSELD TLTATLKQLE NQRGEAQKRL DDLQAQVTKI RDQCHMQEVT INEQEGELNA 300
  301 KRSELQKLKD EEASLQKEYD SNNRELSKLT NHLQATQLQI SSVRSMVTQL LETQRQMTDA 360
  361 LLICRAAMEN QNAELVSEYQ LKIEPDFDEA RKTLTKEVQL PKDDPFEENN SGAANQATNG 420
  421 FGSDPFSGQP VNKPAISTGF DDSFNMSSGF DSGFDAFGQS GAGSAFGQTQ RDPFGSDAFA 480
  481 ANKSNAITPE PGKDDFGSDP FAALHAPTG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.69897
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [727-811]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QGQVLSPNAQ KSGPPPRPES PSPALPPKKS KVPPPRPAPP RAAQPTGGFG SGGGGGFADF  60
   61 DDFDNKNQRT ADVKLETKAV VSVFD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [812-965]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AFGEIGTRKA PTPSLITGPT DFKDDPFKDY RYEDPFSIKD PFAEEGEEEL SEGKGADHKR  60
   61 NFAEDFSSGD EIGSAAKTLS NIVNNNSIKP KAATPLNNDL LQQFDAFNLN SSPAPSHHSG 120
  121 TSYHSNSKPS HDSQTALDAF ADFDDFAATL ATTG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [966-1106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSGAATTATT TGNTKLNNSF FDAFNDNFSV IQSSSVPTGV VRPNDQRAKA FDAFNDNFED  60
   61 QFKTSPNANF AKFDGFEAHN FSSDFGNASF GTTGKEKQNG QVDKKFQSKE PVKDKFAADY 120
  121 SKPESFDADL EEALKRSVLD N

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle