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View Structure Prediction Details

Protein: ST6Gal-PA
Organism: Drosophila melanogaster
Length: 451 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ST6Gal-PA.

Description E-value Query
Range
Subject
Range
gi|85857536 - gi|85857536|gb|ABC86303.1| IP16206p [Drosophila melanogaster]
452.0 [0..1] [451..37]

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Predicted Domain #1
Region A:
Residues: [1-118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQVTRASSG QSQALLSCLI IAVCAALIIQ SGHIQGVKAQ PGREPGEVNS RQPGNGNGTT  60
   61 GHRVPRSVFH VRWNPNEKFI VESRENPAIN SSKLAPHPRL KVSKNTKLTL SPKLYLCH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [119-194]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DKHSELCHNK TQQFRQRIVR AFEKAMVESV NESQANHYNV DYKPVFGDSF EEQYYPSTCL  60
   61 VMEAGVRVLR RKDAPF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [195-451]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NKLPFGRLFP RQKLFRNVKD IKTCAIVSSA GSLAGSKLGR FIDTHDIVMR FNHAPTQGHE  60
   61 VDVGSKTTIR VVNSQVVTKP EFDFTRAPIF RNVTIAAWDP GKYNGTLEDW LTSADYDLFS 120
  121 NYELYRRRYP KSRAFLIDPH SVWRLWQSLQ MFAGNRPISK NPPSSGFIGL ALLLPHCPQV 180
  181 DFVEYVPSTR LNGRCHYYSK EMNSACTFGS WHPLAAEKLM ALDMNMAEDD DMSVFQFGIL 240
  241 RIRRPDKLLC GFNFFGY

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.22
Match: 2drjA
Description: No description for 2drjA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle